https://gut.alessifunctionalhealth.com/main-page
(0:00) Introduction and the body as an integrated system (0:29) The root cause of persistent bloating (0:57) Dr. Alessi's Total Gut Reset framework (1:31) Sponsor: Free webinar invitation (1:54) Case study: Karen's health journey (2:46) Addressing the wrong level of the problem (3:32) Episode overview and ketogenic dieting issues (7:26) Thyroid dysfunction and medication inadequacies (10:28) Misuse of antidepressants for hormone-related issues (13:28) The limitations of generic probiotics (17:28) The common flaw in symptom-focused treatments (18:43) The importance of functional medicine (20:25) Preview of the final episode in the miniseries (21:48) Closing remarks and call to action00:00:00
Body is not just a collection of isolated problems.
00:00:03
It's an integrated system.
00:00:05
Your gut affects your hormones.
00:00:06
Your hormones affect your thyroid.
00:00:08
Your thyroid affects your metabolism and your brain.
00:00:11
Cortisol affects all of it.
00:00:12
Your microbiome regulates your immune system, your neurotransmitter production, and your
00:00:17
ability to detox.
00:00:18
Welcome to Health Decoded, your number one source for real health information with your
00:00:23
host, doctor Alessi and Matt Tack.
00:00:29
Health decoded listeners, if you're dealing with bloating that just won't go away no matter
00:00:35
what you eat, no matter what you try, I need you to hear this.
00:00:40
The bloating isn't the problem.
00:00:42
It's a signal.
00:00:43
Every external symptom you're experiencing, the discomfort, the fatigue, the frustration has a
00:00:50
root cause.
00:00:51
And in my years of clinical practice, it almost always leads back to the gut.
00:00:57
Nothing else in your body can fully heal until that foundation is restored.
00:01:02
I built this framework from my own health journey.
00:01:06
I was that patient, frustrated, dismissed, searching for answers.
00:01:11
I took everything I learned, refined it through years of clinical testing, and have since
00:01:16
helped hundreds of patients achieve complete relief from their symptoms.
00:01:21
That became the Total Gut Reset, a step by step protocol with one goal, reset your gut in six
00:01:29
months or less.
00:01:31
If you're ready to learn exactly what's causing your symptoms and eliminate them for good, I'm
00:01:36
hosting a free webinar where I walk you through the entire framework.
00:01:41
The link is in the show notes.
00:01:42
Go ahead and register, and I'll see you there.
00:01:46
When Karen came to see me, she handed me a list, not a symptoms list.
00:01:51
It was a list of everything she had tried.
00:01:54
She'd written it out the night before, and I could tell it had taken a while for her to put
00:01:58
this together.
00:01:59
Three different elimination diets, including two rounds of keto.
00:02:04
She'd been on thyroid medication for years without significant improvement, an
00:02:09
antidepressant that her doctor had prescribed with ultimately good intentions, but for
00:02:14
symptoms that had started presenting as anxiety and low mood.
00:02:18
She was on a probiotic from a health food store for eighteen months.
00:02:23
She was on hormone creams that she found online, a handful of supplements that somebody
00:02:27
in her Facebook group had recommended.
00:02:30
She slid the list across the desk and said, I've done all of this.
00:02:33
None of it has worked.
00:02:35
So, I'm either doing something wrong or I'm just somebody who can't be fixed.
00:02:39
Now, I want to tell you what I told her, and I want you to hear this clearly.
00:02:43
Nothing on that list failed because of her.
00:02:46
Every single thing she tried failed because it was addressing the wrong level of the problem.
00:02:52
And that's not her failure.
00:02:53
That's a failure of the information she was given.
00:02:56
Every protocol on that list was a logical response to real symptoms.
00:03:01
Keto she tried for weight and her blood sugar.
00:03:04
The thyroid medication she was on because she had a flagged TSH level.
00:03:09
The antidepressant was for her mood.
00:03:11
The probiotic was for her gut health issues.
00:03:14
All of them make sense as to why she tried it, but none of them were designed to address the
00:03:19
actual root cause system.
00:03:22
Now, that distinction between a logical response to symptoms and an actual root cause
00:03:27
solution is what this entire episode is about to be about.
00:03:32
By the end, I want you to understand exactly why those things didn't work and what would
00:03:37
have.
00:03:39
Welcome back to Health Decode It.
00:03:41
I'm Doctor.
00:03:41
Alessi, and this is episode three of a four part miniseries.
00:03:46
We've talked about the gap between not being sick and actually thriving.
00:03:50
We've talked about the real economics of healthcare and what taking action or inaction
00:03:56
actually costs.
00:03:57
Today, we're going more clinical.
00:03:59
We're going to break down specifically and honestly why the most common approaches women
00:04:04
try don't produce lasting results.
00:04:07
I'm going to do it without judgment because every patient I've had this conversation with
00:04:12
was trying to do the right thing with the information they had.
00:04:16
Let's get right into it.
00:04:17
Let's start with ketogenic dieting because it is generally one of the most popular
00:04:22
interventions I hear about in my new patient consultations and because it actually works for
00:04:28
a specific mechanism for a specific timeframe in a specific population of people.
00:04:34
Keto works by dramatically reducing carbohydrate intake, which can lower blood
00:04:39
insulin levels, shifting the body from burning glucose to burning fat for fuel.
00:04:44
For people with insulin resistance, and that's a significant portion of the population, this
00:04:49
can produce some pretty meaningful weight loss changes, improved energy, better blood sugar
00:04:56
control, and it often happens pretty quick.
00:04:59
So why doesn't it last?
00:05:01
Well, the first problem is cortisol.
00:05:04
A very low carb diet is a physiological stress.
00:05:07
It triggers an increase in cortisol, your primary stress hormone.
00:05:11
For a woman in her 40s or 50s who's already dealing with cortisol dysregulation, which as I
00:05:17
talked about in episode one, is extremely common, adding sustained cortisol stress can
00:05:23
accelerate the very hormone disruption she's trying to fix.
00:05:27
Now, elevated cortisol drives storage of fat around the abdominal area.
00:05:33
It disrupts the HPA axis further and it actually antagonizes thyroid function.
00:05:39
The second problem with keto diet is the thyroid.
00:05:42
Prolonged carb restriction, particularly in women, can reduce the conversion of T4 to the
00:05:48
active thyroid hormone T3.
00:05:51
Meaning, you might feel great for eight weeks, then you hit a plateau, then you start feeling
00:05:56
cold, maybe more fatigued, unable to lose weight, despite doing everything right.
00:06:02
This is your thyroid adapting to what it perceives as a famine.
00:06:06
And if you already had subclinical thyroid dysfunction going on, which is common and often
00:06:11
undetected, you've now compounded the problem.
00:06:14
The third problem is the gut.
00:06:16
Ketogenic diets are often very low in fiber and resistant starch that feed the beneficial
00:06:22
bacteria in your microbiome.
00:06:24
Over time, this can reduce microbiome diversity and impair the production of short chain fatty
00:06:30
acids, which are critical for gut barrier integrity, immune regulation, and mitochondrial
00:06:37
energy.
00:06:38
A gut that starts dysbiotic will often become more dysbiotic on a strict keto protocol.
00:06:44
If you want to learn more about gut health and dysbiosis and what those terms mean, go back a
00:06:49
few episodes to the episode I did on gut.
00:06:52
None of this means keto is actually wrong though.
00:06:54
It means that keto is a tool, and like any tool, it produces different results depending
00:07:00
on the context.
00:07:01
Without knowing your cortisol rhythm, your thyroid status, your microbiome, or your
00:07:06
hormonal baseline, using keto is often a guess.
00:07:09
Sometimes it's an educated guess, but it's still a guess, and maybe it's not right for
00:07:15
you.
00:07:16
Now, let's get a little bit into where thyroid plays in, and so why thyroid medication often
00:07:23
isn't enough for these kind of things.
00:07:26
This one I want to spend some time on because thyroid dysfunction is one of the most under
00:07:31
diagnosed and most inadequately treated conditions that I see, particularly in women.
00:07:37
Here's a conventional model.
00:07:38
Primary care physician orders a TSH, thyroid stimulating hormone.
00:07:44
If it's above a certain threshold, you're hypothyroid.
00:07:47
You get a prescription for levothyroxine, which is synthetic T4.
00:07:52
So you take this, your TSH comes back into range.
00:07:55
Your doctor tells you that you're managed, you're good, yet you probably still feel
00:08:00
terrible.
00:08:00
Now, why does this happen?
00:08:02
TSH, which is thyroid stimulating hormone, measures what your pituitary gland is signaling
00:08:07
your thyroid to do.
00:08:09
It does not tell you what your thyroid is actually producing, or even more importantly,
00:08:15
whether your body is actually converting that hormone into its active form and getting it
00:08:20
into the cells.
00:08:22
Here's the chain that most conventional physicians never evaluate.
00:08:26
Your thyroid produces T4, mostly T4, which is a storage hormone.
00:08:30
T4 must then be converted to T3, the active hormone that actually runs your metabolism,
00:08:37
primarily in your liver and in your gut.
00:08:40
If your liver is congested, if your gut is dysbiotic, if you're deficient in selenium or
00:08:45
zinc required for these conversions to happen, if you're under significant physiological
00:08:50
stress, T4 will instead convert to reverse T3, which is essentially a break on your
00:08:56
metabolism.
00:08:57
It blocks T3 receptors and makes you functionally hypothyroid even if your TSH and
00:09:03
T4 look fine.
00:09:05
And so, can get confusing.
00:09:06
I've had patients on thyroid medication for five, ten years who never had their free T3 or
00:09:12
reverse T3 measured, not one time, because it's not on the standard panel.
00:09:17
Now, we measure it, the story changes completely for these people.
00:09:21
Additionally, thyroid medication actually treats the hormone level.
00:09:26
It doesn't treat the gut dysbiosis, which is impairing conversion.
00:09:30
It doesn't treat the adrenal dysfunction that's making the whole system unstable.
00:09:34
It doesn't treat the autoimmune component, Hashimoto's, that in many cases is the actual
00:09:39
driver of the thyroid dysfunction in the first place.
00:09:43
Hashimoto's is an autoimmune condition, so managing thyroid hormone without addressing the
00:09:48
immune system is just that.
00:09:50
It's management.
00:09:51
It's not actually treatment.
00:09:53
Your thyroid isn't an isolated organ.
00:09:56
It's one node in a hormonal network that includes the adrenals, the gut, the liver, and
00:10:02
your immune system.
00:10:03
So treating it in isolation produces partial results at best.
00:10:08
Now, the problem with antidepressants from this patient that we're discussing, I want to make
00:10:16
sure I touch on this.
00:10:17
This is a sensitive topic and I'll address this carefully because the physicians who prescribe
00:10:23
antidepressants to perimenopausal or menopausal women, they're not being negligent.
00:10:28
They're responding to symptoms that look in a quick appointment like depression or anxiety,
00:10:34
and they're prescribing the tool that they have available.
00:10:38
The problem is it's the wrong tool for the underlying cause.
00:10:43
Without understanding the deep underlying cause, that can often lead to more problems
00:10:48
down the line.
00:10:50
Perimenopausal hormone fluctuation, which specifically looks like declining progesterone
00:10:55
and the roller coaster of estrogen, it produces symptoms that are clinically almost
00:11:01
indistinguishable from depression and anxiety.
00:11:05
If you're not looking at the hormonal picture, irritability, sleep disruption, mood
00:11:09
instability, this kind of flattened effect, inability to concentrate, low motivation, low
00:11:15
mood.
00:11:16
These are textbook perimenopause symptoms.
00:11:19
They're also textbook presentations for referral to psychiatry.
00:11:23
So, it's very important to make the distinction.
00:11:26
When it comes to being a doctor, we always say first do no harm.
00:11:30
And so, if we're not addressing the deeper underlying causes and just prescribing
00:11:35
medication, we are not following the do no harm policy.
00:11:39
SSRIs, they work by modulating serotonin signaling.
00:11:43
They don't actually restore hormones.
00:11:45
They don't restore progesterone.
00:11:47
They don't stabilize estrogen.
00:11:49
They do not address the HPA axis dysregulation that is often occurring.
00:11:54
So, might blunt some of the emotional symptoms, which can feel like maybe a partial
00:11:59
improvement, while the underlying hormonal cause continues to progress untouched.
00:12:05
And they carry a cost.
00:12:07
So SSRIs can blunt libido, they can impair your sleep architecture, they can cause weight gain.
00:12:13
And kind of relevant to our earlier conversation, they do not address the root
00:12:18
cause, so patients often remain on them indefinitely because it's never resolved.
00:12:23
Soon as they come off, they're right back to that feeling of lousy.
00:12:27
I've had patients who've come to me.
00:12:29
They've been on antidepressants for years, maybe five, six, seven years, and for what was
00:12:36
from the beginning a hormone problem.
00:12:38
When we address the hormonal root cause, their mood symptoms often resolve and there's no need
00:12:44
for these antidepressants in the first place.
00:12:46
Now, it's not always the case, that's why I wanted to preface it.
00:12:49
Genuine mood disorders, they require the appropriate treatment, but it is the case often
00:12:55
enough that it represents a significant systemic failure in how midlife women are
00:12:59
evaluated and treated.
00:13:01
That's why we actually work hand in hand with psychiatrists.
00:13:05
We have a very trusted psychiatrist that we will go back and forth with patients and, Hey,
00:13:11
does it require medication at this point?
00:13:13
Or is this more of a functional issue that we need to restore balance and homeostasis?
00:13:18
And so, if you're on an antidepressant and you've never had a comprehensive hormone panel,
00:13:23
that's a conversation worth having with a clinician who will actually look at the whole
00:13:26
picture.
00:13:27
You can give us a call anytime.
00:13:28
You can reach out if you're a listener and you want to just have a fifteen minute discovery
00:13:33
call, we do those all the time to see if this is something that we can help benefit you.
00:13:39
Now, getting into the next piece of this patient, the probiotic conversation.
00:13:44
So, a probiotic that doesn't work is worth as much as what it is.
00:13:49
The probiotic market is worth billions of dollars and the vast majority of the products
00:13:55
driving that market are actually clinically inadequate and they have pretty meaningless gut
00:14:01
therapeutic purpose.
00:14:03
Here's why.
00:14:04
Most commercial products, the probiotics, contain a small number of bacterial strains.
00:14:09
It's often lactobacillus, acidophilus, and a few others at the concentrations that are
00:14:16
basically borderline relevant at best.
00:14:19
But more importantly, the probiotic you buy at a health food store isn't selected for your
00:14:25
microbiome.
00:14:26
It's a generic product designed for general sale.
00:14:30
Your microbiome is a community of trillions of organisms with over a thousand distinct
00:14:36
species.
00:14:37
Supplementing two or three generic strains without knowing what your microbiome actually
00:14:42
looks like is trying to fix a very specific engine problem by randomly adding some generic
00:14:48
car parts to it.
00:14:50
It's a of a crude example, but it makes sense.
00:14:53
The second issue is sequencing.
00:14:56
If your gut has significant dysbiosis, meaning an overgrowth of potentially pathogenic
00:15:02
bacteria, fungus, parasites, or having compromised gut barrier integrity like leaky
00:15:08
gut, if you just go adding probiotics into that before addressing the problem, it's going to be
00:15:14
futile and often make the problem worse.
00:15:18
You're trying to plant seeds in soil that hasn't been prepared.
00:15:21
And so, we actually utilize a system at Ascend Functional Health called the 6R protocol, Total
00:15:28
Gut Reset, we follow a systematic approach where we number one, remove.
00:15:34
Then we replace, reinoculate, repair, rebalance, and then reintroduce the system.
00:15:40
It exists precisely because sequencing matters.
00:15:44
You're reinoculating where you're putting beneficial bacteria back in as step one, you're
00:15:50
skipping steps and oftentimes you're not going to be able to get the gut back to the full
00:15:55
health where it needs to be.
00:15:58
Now, the third issue with probiotics is that probiotics alone don't address the gut barrier.
00:16:04
Leaky gut, which is that increased intestinal permeability, did a podcast on this a few
00:16:10
episodes back, go listen to that.
00:16:12
This is a driver of systemic inflammation.
00:16:15
Anytime a patient comes in and they have immune dysregulation, food sensitivities, brain fog,
00:16:21
fatigue, joint pain, eczema, itchy skin, those kind of things, we're looking at leaky gut.
00:16:28
Probiotics don't actually repair the gut lining.
00:16:31
That requires specific therapeutic nutrition, targeted nutrients, things like L glutamine,
00:16:36
zinc, carnosine, removing obviously the inflammatory drivers that cause the damage in
00:16:41
the first place.
00:16:42
That's why remove is always step one.
00:16:45
A quality, strain specific probiotic used at the right point in a comprehensive system
00:16:52
protocol can be genuinely therapeutic.
00:16:55
Now, a generic probiotic from the supplement aisle of the store used without any assessment
00:17:00
of your gut problem, save your money because it's going to be counterproductive.
00:17:05
The common thread of everything what we're getting at in this whole mini series that I
00:17:10
wanted to really just educate on is that every approach we've talked about, keto, thyroid
00:17:16
focused medications, antidepressants, generic probiotic use, these all share a common flaw.
00:17:23
They're designed to address a symptom or a single biomarker in isolation.
00:17:28
They're not designed to address the underlying biological system.
00:17:33
Your body is not just a collection of isolated problems, it's an integrated system.
00:17:38
Your gut affects your hormones.
00:17:40
Your hormones affect your thyroid.
00:17:41
Your thyroid affects your metabolism and your brain.
00:17:44
Cortisol affects all of it.
00:17:46
Your microbiome regulates your immune system, your neurotransmitter production, and your
00:17:50
ability to detox and absorb nutrients.
00:17:53
So, these systems do not operate in individual columns.
00:17:57
When you treat one piece without understanding how it connects to the whole, you get partial
00:18:03
results.
00:18:03
At worse, you actually address one problem while maybe inadvertently worsening another.
00:18:09
As with the example of keto driving cortisol elevation or the thyroid medication ignoring
00:18:16
the adrenal codysfunction.
00:18:18
Now, this is not a criticism of people who recommended those things to you, if you've ever
00:18:23
experienced this.
00:18:24
It's a description of a functional foundational limitation in how medicine is structured.
00:18:31
Conventional medicine is organized by specialty, an endocrinologist for your thyroid,
00:18:35
a gastro for your gut, psychiatrist for mood.
00:18:39
But it's rare that in conventional medicine, anyone is looking at the entirety.
00:18:43
No one is asking how the thyroid dysfunction or the gut dysbiosis or the hormonal axis
00:18:49
disruption and the moods are all connected because they're all manifestations of a same
00:18:54
underlying biological state.
00:18:57
Systems medicine, what we call functional medicine, starts from the opposite premise.
00:19:03
Everything is connected.
00:19:04
The question is always, what is driving the system into dysfunction?
00:19:09
And the answer is almost never a single thing.
00:19:12
So, Karen, that I was discussing from the start of this episode, when we finally had her
00:19:16
complete picture, we found exactly what I'd have predicted, Significant gut dysbiosis,
00:19:23
impairing her thyroid hormone conversion, HPA axis dysfunction, which elevated her cortisol,
00:19:30
disrupted her sleep, her body composition.
00:19:32
She had estrogen dominance driven partly by impaired gut estrogen metabolism and liver
00:19:38
basically backed up in a micronutrient profile that made multiple systems deficient of those
00:19:45
raw materials that they actually need to function.
00:19:48
Once we had that whole picture, we actually were able to build a protocol that addressed
00:19:53
them in the right sequence.
00:19:55
Within four months, she was off antidepressants, working with her prescribing
00:19:59
physician that wasn't us.
00:20:01
Her thyroid medication was adjusted based on a proper panel.
00:20:05
Her energy had fundamentally changed.
00:20:07
She lost weight that hadn't budged in years.
00:20:10
She came back at her follow-up and she left us a review saying she's not a person who can't be
00:20:16
fixed.
00:20:17
And she was skeptical, but she was just working with a map that was missing most of the
00:20:22
picture.
00:20:23
And so that's it.
00:20:25
That is exactly it.
00:20:27
Now, I want to leave you guys with this today.
00:20:30
Next week is the final episode in this series, and it's the one I'm looking forward to the
00:20:35
most because it's all about the destination.
00:20:38
We've been building this story over the last few weeks, and this is about what actually
00:20:43
thriving in your fifties and sixties and beyond looks like.
00:20:47
Not just managing decline, but genuinely optimizing yourself.
00:20:51
If you stayed with me for three episodes, episode four is where it's going to pay off.
00:20:56
If today's episode described your experience or this felt like it hit home to you, the
00:21:02
approaches you've tried, maybe partial results, frustration from not getting where you want to
00:21:07
be, I want to invite you to have a different kind of conversation.
00:21:11
Not a conversation about just managing your symptoms too.
00:21:14
Conversation about actually finding the root cause for once.
00:21:18
You can book a discovery call.
00:21:19
The link in the show notes will take you to our page.
00:21:22
Bring your history, bring your labs.
00:21:24
If we need to run other labs, we can do that.
00:21:27
Let me know all the things you've tried.
00:21:29
I need to know everything because it all plays into your story in which I can then build a
00:21:34
complete picture.
00:21:35
So again, I'm Doctor.
00:21:36
Alessi.
00:21:37
This is Health Decoded.
00:21:38
I appreciate you sticking with me.
00:21:40
I look forward to seeing you in the final episode of this four part miniseries.
00:21:45
See you next week.
00:21:46
Thank
00:21:48
you for tuning in to Health Decoded, where we break down the truth about all things health
00:21:53
and empower you to take charge of your well-being.
00:21:56
If you found value in today's episode, please subscribe, leave a review, and share it with
00:22:01
someone who needs to hear this.
00:22:03
For more resources, personalized support, or to have your questions answered live on the show,
00:22:08
Visit Ascend Functional Health and head to the contact page to connect with us directly.
00:22:13
Until next time, stay curious, stay empowered, and remember, your health is in your hands.

